If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 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'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 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'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 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'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 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'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 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'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 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'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 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'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 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'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 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'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 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'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 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'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 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'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 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'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 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'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 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'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 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'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 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'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 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'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 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'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 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'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 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'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 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'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 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'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 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'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 'cil', 'CiPaw.06G044100' => 'cil', 'CiPaw.09G208400' => 'cil', 'CiPaw.10G051800' => 'cil', 'CiPaw.10G156000' => 'cil', 'CiPaw.11G114000' => 'cil', 'CiPaw.11G172100' => 'cil', 'ClCG01G000240' => 'cla', 'ClCG01G000250' => 'cla', 'ClCG03G008050' => 'cla', 'ClCG04G007130' => 'cla', 'ClCG05G000630' => 'cla', 'ClCG07G004100' => 'cla', 'ClCG11G006240' => 'cla', 'ClCG11G017850' => 'cla', 'COL.COLO4_10778' => 'col', 'COL.COLO4_16813' => 'col', 'COL.COLO4_16814' => 'col', 'COL.COLO4_25697' => 'col', 'COL.COLO4_31908' => 'col', 'COL.COLO4_36714' => 'col', 'Cpa.g.c42631' => 'cpa', 'Cpa.g.sc175.9' => 'cpa', 'Cpa.g.sc19.186' => 'cpa', 'Cpa.g.sc3.117' => 'cpa', 'Cpa.g.sc3.119' => 'cpa', 'Cre07.g355500' => 'cre', 'Cre08.g377550' => 'cre', 'CsaV3_1G012500' => 'csa', 'CsaV3_3G007850' => 'csa', 'CsaV3_4G026110' => 'csa', 'CsaV3_4G033490' => 'csa', 'CsaV3_5G000330' => 'csa', 'CsaV3_5G000340' => 'csa', 'CsaV3_5G009020' => 'csa', 'CsaV3_6G001750' => 'csa', 'CSS0000637' => 'camsi', 'CSS0008203' => 'camsi', 'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ), 'gf_id' => 'HOM05D000553', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000553' ), 'data_identifier' => 'HOM05D000553', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000553', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '992', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p19190' => 'bna', 'A01p19200' => 'bna', 'A02p10680' => 'bna', 'A02p36220' => 'bna', 'A03p36990' => 'bna', 'A04p30060' => 'bna', 'A05p38070' => 'bna', 'A05p39860' => 'bna', 'A07p22700' => 'bna', 'A08p20350' => 'bna', 'A09p48870' => 'bna', 'A10p11300' => 'bna', 'A10p11310' => 'bna', 'Aa31LG10G10850' => 'aar', 'Aa31LG3G4540' => 'aar', 'Aa31LG3G4560' => 'aar', 'Aa31LG3G9700' => 'aar', 'Aa31LG5G18960' => 'aar', 'Aa31LG5G19490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3381' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1215' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.713' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.3277' => 'aag', 'Actinidia00942' => 'ach', 'Actinidia04165' => 'ach', 'Actinidia06130' => 'ach', 'Actinidia07596' => 'ach', 'Actinidia08670' => 'ach', 'Actinidia09704' => 'ach', 'Actinidia11599' => 'ach', 'Actinidia13931' => 'ach', 'Actinidia18669' => 'ach', 'Actinidia20728' => 'ach', 'Actinidia22198' => 'ach', 'Actinidia27224' => 'ach', 'Actinidia28104' => 'ach', 'Actinidia29109' => 'ach', 'Actinidia29694' => 'ach', 'Actinidia33930' => 'ach', 'Actinidia34242' => 'ach', 'Ah.05g179290' => 'amhyb', 'Ah.06g184560' => 'amhyb', 'Ah.12g053080' => 'amhyb', 'Ah.13g070530' => 'amhyb', 'Ah.14g089650' => 'amhyb', 'Ah.16g103430' => 'amhyb', 'AL3G20010' => 'aly', 'AL3G22750' => 'aly', 'AL4G37760' => 'aly', 'AL5G37180' => 'aly', 'AL71U10050' => 'aly', 'AL7G24910' => 'aly', 'AL7G24920' => 'aly', 'AL8G29050' => 'aly', 'Aqoxy1G02328' => 'aox', 'Aqoxy1G04003' => 'aox', 'Aqoxy2G00922' => 'aox', 'Aqoxy4G02601' => 'aox', 'Aqoxy4G02602' => 'aox', 'Aqoxy5G04317' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2SI9Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.37BVBG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5058JZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5I106H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.69D7A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NP7E0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7A6EAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DT1206' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9T2J1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FG3B3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GGW6I3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HUHC45' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8NNXW' => 'arhy', 'AT2G40110' => 'ath', 'AT3G08990' => 'ath', 'AT3G11230' => 'ath', 'AT3G55890' => 'ath', 'AT4G27740' => 'ath', 'AT4G27745' => 'ath', 'AT5G53940' => 'ath', 'ATR0033G008' => 'atr', 'ATR0618G218' => 'atr', 'ATR0697G093' => 'atr', 'ATR0810G199' => 'atr', 'Atru.chr1.2358' => 'acertr', 'Atru.chr10.1811' => 'acertr', 'Atru.chr12.20' => 'acertr', 'Atru.chr12.2298' => 'acertr', 'Atru.chr12.2300' => 'acertr', 'Atru.chr2.2412' => 'acertr', 'Atru.chr5.717' => 'acertr', 'Atru.chr8.2225' => 'acertr', 'Atru.chr9.1905' => 'acertr', 'AUR62004526' => 'cqu', 'AUR62006051' => 'cqu', 'AUR62007037' => 'cqu', 'AUR62011037' => 'cqu', 'AUR62012237' => 'cqu', 'AUR62014854' => 'cqu', 'AUR62017050' => 'cqu', 'AUR62019901' => 'cqu', 'AUR62022729' => 'cqu', 'AUR62022869' => 'cqu', 'AUR62033411' => 'cqu', 'BcaB01g00051' => 'bca', 'BcaB01g00054' => 'bca', 'BcaB02g07672' => 'bca', 'BcaB02g08392' => 'bca', 'BcaB02g08394' => 'bca', 'BcaB03g12543' => 'bca', 'BcaB04g21142' => 'bca', 'BcaB05g22093' => 'bca', 'BcaB06g25637' => 'bca', 'BcaB06g29128' => 'bca', 'BcaB07g30104' => 'bca', 'BcaB07g30105' => 'bca', 'BcaC01g04134' => 'bca', 'BcaC02g07353' => 'bca', 'BcaC03g14366' => 'bca', 'BcaC04g20403' => 'bca', 'BcaC05g29391' => 'bca', 'BcaC05g29633' => 'bca', 'BcaC07g38293' => 'bca', 'BcaC08g44756' => 'bca', 'BcaC09g48161' => 'bca', 'BcaC09g50543' => 'bca', 'BcaC09g50544' => 'bca', 'BcaNung01624' => 'bca', 'BcaNung01625' => 'bca', 'BcaNung01629' => 'bca', 'BcaNung01630' => 'bca', 'BcaNung01633' => 'bca', 'BcaNung01634' => 'bca', 'BolC1t02366H' => 'bol', 'BolC1t02367H' => 'bol', 'BolC1t05326H' => 'bol', 'BolC2t11565H' => 'bol', 'BolC3t16741H' => 'bol', 'BolC4t26760H' => 'bol', 'BolC4t28283H' => 'bol', 'BolC5t34283H' => 'bol', 'BolC5t34350H' => 'bol', 'BolC5t34542H' => 'bol', 'BolC6t37494H' => 'bol', 'BolC7t46049H' => 'bol', 'BolC8t47387H' => 'bol', 'BolC8t47435H' => 'bol', 'BolC8t47437H' => 'bol', 'BolC8t47448H' => 'bol', 'BolC8t47453H' => 'bol', 'BolC8t48724H' => 'bol', 'BolC8t50744H' => 'bol', 'BolC9t57280H' => 'bol', 'BraA01t01861Z' => 'bra', 'BraA01t01862Z' => 'bra', 'BraA01t04193Z' => 'bra', 'BraA02t06131Z' => 'bra', 'BraA02t08617Z' => 'bra', 'BraA02t08620Z' => 'bra', 'BraA02t08621Z' => 'bra', 'BraA02t08622Z' => 'bra', 'BraA03t12861Z' => 'bra', 'BraA03t14816Z' => 'bra', 'BraA04t18500Z' => 'bra', 'BraA05t22599Z' => 'bra', 'BraA05t22770Z' => 'bra', 'BraA07t27978Z' => 'bra', 'BraA07t29938Z' => 'bra', 'BraA08t33993Z' => 'bra', 'BraA09t40342Z' => 'bra', 'BraA10t43222Z' => 'bra', 'C01p24090' => 'bna', 'C01p24100' => 'bna', 'C01p30900' => 'bna', 'C02p55190' => 'bna', 'C02p55200' => 'bna', 'C03p44780' => 'bna', 'C04p51870' => 'bna', 'C04p67790' => 'bna', 'C05p56190' => 'bna', 'C05p56860' => 'bna', 'C05p58900' => 'bna', 'C06p23210' => 'bna', 'C08p05720' => 'bna', 'C08p10380' => 'bna', 'C08p31210' => 'bna', 'CAN.G1415.11' => 'can', 'CAN.G154.12' => 'can', 'CAN.G1616.2' => 'can', 'CAN.G162.37' => 'can', 'CAN.G213.19' => 'can', 'CAN.G301.3' => 'can', 'CAN.G360.8' => 'can', 'CAN.G481.49' => 'can', 'CAN.G481.50' => 'can', 'CANSAT21G0288' => 'cansat', 'CANSAT21G2432' => 'cansat', 'CANSAT21G2518' => 'cansat', 'CANSAT35G0888' => 'cansat', 'CANSAT56G1238' => 'cansat', 'CANSAT56G1463' => 'cansat', 'CANSAT56G2997' => 'cansat', 'CANSAT56G3951' => 'cansat', 'CARHR083330' => 'chi', 'CARHR085790' => 'chi', 'CARHR135080' => 'chi', 'CARHR165990' => 'chi', 'CARHR235460' => 'chi', 'CARHR235470' => 'chi', 'CARHR267080' => 'chi', 'CARHR273740' => 'chi', 'Carub.0003s0812' => 'cru', 'Carub.0003s1054' => 'cru', 'Carub.0004s2228' => 'cru', 'Carub.0005s2266' => 'cru', 'Carub.0007s1307' => 'cru', 'Carub.0007s1308' => 'cru', 'Carub.0008s1425' => 'cru', 'Carub.0008s2082' => 'cru', 'Carub.0008s2092' => 'cru', 'Ca_05953_v3' => 'car', 'Ca_07630_v3' => 'car', 'Ca_15269_v3' => 'car', 'Ca_16730_v3' => 'car', 'Ca_23042_v3' => 'car', 'CBR_g42150' => 'cbr', 'CBR_g45170' => 'cbr', 'CBR_g8318' => 'cbr', 'Cc02_g01190' => 'ccan', 'Cc02_g06640' => 'ccan', 'Cc05_g11760' => 'ccan', 'Cc06_g17350' => 'ccan', 'Cc08_g16620' => 'ccan', 'CDE02G4112' => 'cde', 'CDE04G0477' => 'cde', 'CDE12G0778' => 'cde', 'Cfa001329' => 'cfa', 'Cfa011940' => 'cfa', 'Cfa016199' => 'cfa', 'Cfa016200' => 'cfa', 'Cfa017215' => 'cfa', 'Cfa025427' => 'cfa', 'Ciclev10009870m.g' => 'ccl', 'Ciclev10013102m.g' => 'ccl', 'Ciclev10016709m.g' => 'ccl', 'Ciclev10017171m.g' => 'ccl', 'Ciclev10022976m.g' => 'ccl', 'Ciclev10022978m.g' => 'ccl', 'Ciclev10022980m.g' => 'ccl', 'Ciclev10022988m.g' => 'ccl', 'Ciclev10033070m.g' => 'ccl', 'CiPaw.01G249500' => 'cil', 'CiPaw.01G297500' => 'cil', 'CiPaw.02G191700' => 'cil', 'CiPaw.05G199000' => 'cil', 'CiPaw.05G199700' => 'cil', 'CiPaw.05G199800' => 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'CSS0011137' => 'camsi', 'CSS0011522' => 'camsi', 'CSS0015883' => 'camsi', 'CSS0018958' => 'camsi', 'CSS0021514' => 'camsi', 'CSS0021801' => 'camsi', 'CSS0023339' => 'camsi', 'CSS0025437' => 'camsi', 'CSS0025442' => 'camsi', 'CSS0027389' => 'camsi', 'CSS0028914' => 'camsi', 'CSS0037102' => 'camsi', 'CSS0040155' => 'camsi', 'CSS0046582' => 'camsi', 'DCAR_005323' => 'dca', 'DCAR_011805' => 'dca', 'DCAR_013120' => 'dca', 'DCAR_014552' => 'dca', 'DCAR_015429' => 'dca', 'DCAR_018709' => 'dca', 'DCAR_020345' => 'dca', 'Dinv02414' => 'din', 'Dinv17341' => 'din', 'Dinv17982' => 'din', 'Dinv20200' => 'din', 'Dinv23094' => 'din', 'Dinv29248' => 'din', 'Dinv34394' => 'din', 'Duzib068G0292' => 'dzi', 'Duzib068G0400' => 'dzi', 'Duzib068G1208' => 'dzi', 'Duzib084G0448' => 'dzi', 'Duzib084G0592' => 'dzi', 'Duzib093G0452' => 'dzi', 'Duzib106G0047' => 'dzi', 'Duzib106G1055' => 'dzi', 'Duzib114G0020' => 'dzi', 'Duzib128G1896' => 'dzi', 'Duzib192G0844' => 'dzi', 'Duzib205G0873' => 'dzi', 'Duzib205G1264' => 'dzi', 'Duzib244G0004' => 'dzi', 'Duzib268G0253' => 'dzi', 'ECA233G1760' => 'eca', 'ECA233G6106' => 'eca', 'ECA234G3053' => 'eca', 'ECA236G4021' => 'eca', 'ECA238G0248' => 'eca', 'ECA238G1851' => 'eca', 'ECA240G2721' => 'eca', 'ECA246G4430' => 'eca', 'ECA247G3097' => 'eca', 'EL10Ac1g00228' => 'bvu', 'EL10Ac2g04816' => 'bvu', 'EL10Ac3g05227' => 'bvu', 'EL10Ac3g05229' => 'bvu', 'EL10Ac4g08235' => 'bvu', 'EL10Ac5g12457' => 'bvu', 'EL10Ac8g18552' => 'bvu', 'EL10Ac8g18554' => 'bvu', 'EL10Ac8g18555' => 'bvu', 'EL10Ac8g20223' => 'bvu', 'EL10Ac8g20426' => 'bvu', 'Eucgr.A01437' => 'egr', 'Eucgr.A01438' => 'egr', 'Eucgr.D00600' => 'egr', 'Eucgr.D00602' => 'egr', 'Eucgr.D00603' => 'egr', 'Eucgr.D01431' => 'egr', 'Eucgr.E00031' => 'egr', 'Eucgr.E01033' => 'egr', 'Eucgr.F01163' => 'egr', 'Eucgr.J00225' => 'egr', 'Eucgr.K00408' => 'egr', 'FAN01G0172' => 'fan', 'FAN01G1959' => 'fan', 'FAN01G2385' => 'fan', 'FAN02G3104' => 'fan', 'FAN03G1150' => 'fan', 'FAN03G2890' => 'fan', 'FAN03G2919' => 'fan', 'FAN04G1659' => 'fan', 'FAN06G0623' => 'fan', 'FAN06G1361' => 'fan', 'FAN06G1837' => 'fan', 'FAN06G3344' => 'fan', 'FAN06G3719' => 'fan', 'FAN08G1450' => 'fan', 'FAN09G0351' => 'fan', 'FAN10G1703' => 'fan', 'FAN10G2751' => 'fan', 'FAN10G3202' => 'fan', 'FAN11G0124' => 'fan', 'FAN11G3355' => 'fan', 'FAN13G0312' => 'fan', 'FAN14G3942' => 'fan', 'FAN16G2913' => 'fan', 'FAN16G2921' => 'fan', 'FAN18G2863' => 'fan', 'FAN18G3198' => 'fan', 'FAN21G0565' => 'fan', 'FAN21G3769' => 'fan', 'FAN25G0599' => 'fan', 'FAN25G3057' => 'fan', 'FvH4_3g00710' => 'fve', 'FvH4_3g08780' => 'fve', 'FvH4_3g19470' => 'fve', 'FvH4_5g11070' => 'fve', 'FvH4_6g11560' => 'fve', 'FvH4_7g17070' => 'fve', 'FvH4_7g24340' => 'fve', 'FvH4_7g32183' => 'fve', 'FvH4_7g32220' => 'fve', 'Glyma.02G256700' => 'gma', 'Glyma.04G233200' => 'gma', 'Glyma.06G131600' => 'gma', 'Glyma.07G053400' => 'gma', 'Glyma.07G148700' => 'gma', 'Glyma.07G199600' => 'gma', 'Glyma.10G173200' => 'gma', 'Glyma.11G228600' => 'gma', 'Glyma.12G162800' => 'gma', 'Glyma.12G226700' => 'gma', 'Glyma.13G176800' => 'gma', 'Glyma.13G274000' => 'gma', 'Glyma.14G060000' => 'gma', 'Glyma.14G159100' => 'gma', 'Glyma.16G022500' => 'gma', 'Glyma.16G080800' => 'gma', 'Glyma.18G028500' => 'gma', 'Glyma.18G199800' => 'gma', 'Glyma.20G217000' => 'gma', 'Gohir.A01G061300' => 'ghi', 'Gohir.A04G035400' => 'ghi', 'Gohir.A05G329500' => 'ghi', 'Gohir.A08G081300' => 'ghi', 'Gohir.A09G164600' => 'ghi', 'Gohir.A10G187000' => 'ghi', 'Gohir.A11G015300' => 'ghi', 'Gohir.A11G015500' => 'ghi', 'Gohir.A11G329400' => 'ghi', 'Gohir.A12G239200' => 'ghi', 'Gohir.A13G015800' => 'ghi', 'Gohir.D01G047900' => 'ghi', 'Gohir.D03G116000' => 'ghi', 'Gohir.D04G067500' => 'ghi', 'Gohir.D05G348000' => 'ghi', 'Gohir.D08G123600' => 'ghi', 'Gohir.D09G160200' => 'ghi', 'Gohir.D11G012501' => 'ghi', 'Gohir.D11G015400' => 'ghi', 'Gohir.D11G348500' => 'ghi', 'Gohir.D12G240400' => 'ghi', 'Gohir.D13G016900' => 'ghi', 'Gorai.002G067700' => 'gra', 'Gorai.003G122200' => 'gra', 'Gorai.004G130300' => 'gra', 'Gorai.006G181800' => 'gra', 'Gorai.007G015900' => 'gra', 'Gorai.007G016100' => 'gra', 'Gorai.007G378800' => 'gra', 'Gorai.008G257400' => 'gra', 'Gorai.009G375800' => 'gra', 'Gorai.012G076700' => 'gra', 'Gorai.013G018700' => 'gra', 'GSVIVG01006543001' => 'vvi', 'GSVIVG01014293001' => 'vvi', 'GSVIVG01019631001' => 'vvi', 'GSVIVG01027191001' => 'vvi', 'GSVIVG01032841001' => 'vvi', 'GSVIVG01032842001' => 'vvi', 'GSVIVG01033969001' => 'vvi', 'GSVIVG01038594001' => 'vvi', 'GSVIVG01038595001' => 'vvi', 'HanXRQChr02g0047231' => 'han', 'HanXRQChr03g0086511' => 'han', 'HanXRQChr05g0157611' => 'han', 'HanXRQChr07g0192121' => 'han', 'HanXRQChr07g0202921' => 'han', 'HanXRQChr08g0222131' => 'han', 'HanXRQChr10g0293791' => 'han', 'HanXRQChr12g0370521' => 'han', 'HanXRQChr15g0495441' => 'han', 'HanXRQChr16g0524711' => 'han', 'Haze_00256' => 'cav', 'Haze_06395' => 'cav', 'Haze_09147' => 'cav', 'Haze_09467' => 'cav', 'Haze_17215' => 'cav', 'Haze_20992' => 'cav', 'Haze_26237' => 'cav', 'Haze_27499' => 'cav', 'Hma1.2p1_0203F.1_g086620' => 'hma', 'Hma1.2p1_0281F.1_g113020' => 'hma', 'Hma1.2p1_0362F.1_g136135' => 'hma', 'Hma1.2p1_0446F.1_g154560' => 'hma', 'Hma1.2p1_0456F.1_g156555' => 'hma', 'Hma1.2p1_0512F.1_g169370' => 'hma', 'Hma1.2p1_0558F.1_g178610' => 'hma', 'Hma1.2p1_1616F.1_g293750' => 'hma', 'HPP92_004950' => 'vpl', 'HPP92_009569' => 'vpl', 'HPP92_015496' => 'vpl', 'HPP92_019259' => 'vpl', 'HPP92_026183' => 'vpl', 'HPP92_026194' => 'vpl', 'Hund09174' => 'sun', 'Hund11635' => 'sun', 'Hund13849' => 'sun', 'Hund15946' => 'sun', 'Hund22885' => 'sun', 'Hund23790' => 'sun', 'Hund27173' => 'sun', 'Lalb_Chr01g0006601' => 'lal', 'Lalb_Chr02g0155021' => 'lal', 'Lalb_Chr03g0043171' => 'lal', 'Lalb_Chr03g0043181' => 'lal', 'Lalb_Chr04g0250621' => 'lal', 'Lalb_Chr08g0240041' => 'lal', 'Lalb_Chr10g0100711' => 'lal', 'Lalb_Chr10g0105121' => 'lal', 'Lalb_Chr11g0067041' => 'lal', 'Lalb_Chr14g0372411' => 'lal', 'Lalb_Chr16g0383951' => 'lal', 'Lalb_Chr17g0346741' => 'lal', 'Lalb_Chr19g0134111' => 'lal', 'Lj1C1023G9' => 'lonja', 'Lj1g0010219' => 'lja', 'Lj1g0022947' => 'lja', 'Lj1g0024080' => 'lja', 'Lj1g0027442' => 'lja', 'Lj2A158G77' => 'lonja', 'Lj2A76T80' => 'lonja', 'Lj3g0003253' => 'lja', 'Lj3g0004087' => 'lja', 'Lj3g0009267' => 'lja', 'Lj3g0021761' => 'lja', 'Lj3g0026055' => 'lja', 'Lj4g0018570' => 'lja', 'Lj5g0005855' => 'lja', 'Lj6g0002024' => 'lja', 'Lj6g0015791' => 'lja', 'Lj6g0019932' => 'lja', 'Lj8A68T47' => 'lonja', 'LjContig00357g0010180' => 'lja', 'Lsat_1_v5_gn_2_122861' => 'lsa', 'Lsat_1_v5_gn_3_140440' => 'lsa', 'Lsat_1_v5_gn_4_30781' => 'lsa', 'Lsat_1_v5_gn_6_109401' => 'lsa', 'Lsat_1_v5_gn_6_9101' => 'lsa', 'Lsat_1_v5_gn_7_104620' => 'lsa', 'Lsat_1_v5_gn_8_12320' => 'lsa', 'Lsat_1_v5_gn_9_33821' => 'lsa', 'Manes.01G036800' => 'mes', 'Manes.01G243400' => 'mes', 'Manes.02G004200' => 'mes', 'Manes.03G106400' => 'mes', 'Manes.05G020100' => 'mes', 'Manes.05G192400' => 'mes', 'Manes.05G192500' => 'mes', 'Manes.05G192760' => 'mes', 'Manes.07G128400' => 'mes', 'Manes.08G091500' => 'mes', 'Manes.10G013800' => 'mes', 'Manes.17G048300' => 'mes', 'Mapoly0011s0154' => 'mpo', 'Mapoly0026s0047' => 'mpo', 'Mapoly0047s0020' => 'mpo', 'MBI03_g26335_MAGBIO' => 'mbi', 'MBI04_g06927_MAGBIO' => 'mbi', 'MBI05_g34497_MAGBIO' => 'mbi', 'MBI07_g17483_MAGBIO' => 'mbi', 'MBI12_g03906_MAGBIO' => 'mbi', 'MBI12_g28745_MAGBIO' => 'mbi', 'MBI14_g29548_MAGBIO' => 'mbi', 'MBI18_g03591_MAGBIO' => 'mbi', 'MBI18_g12435_MAGBIO' => 'mbi', 'MCO11G149' => 'mco', 'MD01G1085400' => 'mdo', 'MD01G1132600' => 'mdo', 'MD01G1224700' => 'mdo', 'MD01G1224800' => 'mdo', 'MD03G1231600' => 'mdo', 'MD04G1151100' => 'mdo', 'MD05G1311500' => 'mdo', 'MD06G1104300' => 'mdo', 'MD06G1115600' => 'mdo', 'MD06G1115700' => 'mdo', 'MD06G1115900' => 'mdo', 'MD06G1116700' => 'mdo', 'MD07G1154300' => 'mdo', 'MD07G1220400' => 'mdo', 'MD07G1295300' => 'mdo', 'MD07G1295400' => 'mdo', 'MD10G1290700' => 'mdo', 'MD10G1335700' => 'mdo', 'MD12G1165000' => 'mdo', 'Medtr1g077750' => 'mtr', 'Medtr1g077760' => 'mtr', 'Medtr2g078670' => 'mtr', 'Medtr3g070330' => 'mtr', 'Medtr3g091840' => 'mtr', 'Medtr4g088505' => 'mtr', 'Medtr5g082490' => 'mtr', 'Medtr7g068250' => 'mtr', 'Medtr8g027255' => 'mtr', 'Medtr8g058785' => 'mtr', 'Medtr8g061270' => 'mtr', 'MELO3C003239.2' => 'cme', 'MELO3C005899.2' => 'cme', 'MELO3C005900.2' => 'cme', 'MELO3C006003.2' => 'cme', 'MELO3C008289.2' => 'cme', 'MELO3C025175.2' => 'cme', 'MELO3C025607.2' => 'cme', 'Migut.D02120' => 'egut', 'Migut.F00181' => 'egut', 'Migut.F00676' => 'egut', 'Migut.F01012' => 'egut', 'Migut.F01375' => 'egut', 'Migut.L02006' => 'egut', 'Migut.M00781' => 'egut', 'Migut.N01527' => 'egut', 'MSTRG.10224' => 'ama', 'MSTRG.12194' => 'ama', 'MSTRG.12895' => 'ama', 'MSTRG.13722' => 'ama', 'MSTRG.17363' => 'ama', 'MSTRG.2013' => 'ama', 'MSTRG.210' => 'ama', 'MSTRG.27007' => 'ama', 'MSTRG.28274' => 'ama', 'MSTRG.8323' => 'ama', 'Nitab4.5_0000119g0190' => 'nta', 'Nitab4.5_0000258g0340' => 'nta', 'Nitab4.5_0000332g0140' => 'nta', 'Nitab4.5_0000335g0200' => 'nta', 'Nitab4.5_0000673g0110' => 'nta', 'Nitab4.5_0001455g0060' => 'nta', 'Nitab4.5_0001746g0030' => 'nta', 'Nitab4.5_0001979g0050' => 'nta', 'Nitab4.5_0002330g0120' => 'nta', 'Nitab4.5_0002728g0120' => 'nta', 'Nitab4.5_0002780g0140' => 'nta', 'Nitab4.5_0002780g0160' => 'nta', 'Nitab4.5_0003138g0050' => 'nta', 'Nitab4.5_0003865g0140' => 'nta', 'Nitab4.5_0005017g0040' => 'nta', 'Nitab4.5_0005042g0070' => 'nta', 'Nitab4.5_0005290g0010' => 'nta', 'Nitab4.5_0006477g0070' => 'nta', 'Nitab4.5_0007755g0020' => 'nta', 'Nitab4.5_0011902g0010' => 'nta', 'Nitab4.5_0013919g0020' => 'nta', 'Nn1g00352' => 'nnu', 'Nn1g04180' => 'nnu', 'Nn2g11461' => 'nnu', 'Nn3g18912' => 'nnu', 'Oeu004966.1' => 'oeu', 'Oeu005402.2' => 'oeu', 'Oeu010704.1' => 'oeu', 'Oeu024614.2' => 'oeu', 'Oeu025641.1' => 'oeu', 'Oeu033600.1' => 'oeu', 'Oeu041379.1' => 'oeu', 'Oeu042948.1' => 'oeu', 'Oeu044765.1' => 'oeu', 'Oeu055165.1' => 'oeu', 'Oeu060563.1' => 'oeu', 'Oeu064507.1' => 'oeu', 'Os03g0193075' => 'osa', 'Os03g0698500' => 'osa', 'Os07g0584000' => 'osa', 'Os10g0369500' => 'osa', 'Os11g0551800' => 'osa', 'Os12g0484700' => 'osa', 'Peaxi162Scf00000g00303' => 'pax', 'Peaxi162Scf00014g00053' => 'pax', 'Peaxi162Scf00069g01736' => 'pax', 'Peaxi162Scf00074g00338' => 'pax', 'Peaxi162Scf00141g00334' => 'pax', 'Peaxi162Scf00345g00034' => 'pax', 'Peaxi162Scf00716g00429' => 'pax', 'Peaxi162Scf00740g00324' => 'pax', 'Peaxi162Scf00740g00325' => 'pax', 'Peaxi162Scf00740g00333' => 'pax', 'Peaxi162Scf00825g00027' => 'pax', 'Peaxi162Scf01208g00149' => 'pax', 'PGR004G2016' => 'pgr', 'PGR031G1061' => 'pgr', 'PGR031G1145' => 'pgr', 'PGR042G0852' => 'pgr', 'PGR042G1129' => 'pgr', 'PGR044G0199' => 'pgr', 'PGR142G4141' => 'pgr', 'PGSC0003DMG400005850' => 'stu', 'PGSC0003DMG400007778' => 'stu', 'PGSC0003DMG400008490' => 'stu', 'PGSC0003DMG400011933' => 'stu', 'PGSC0003DMG400015367' => 'stu', 'PGSC0003DMG400018517' => 'stu', 'PGSC0003DMG400018518' => 'stu', 'PGSC0003DMG400019124' => 'stu', 'PGSC0003DMG400020743' => 'stu', 'PGSC0003DMG400023303' => 'stu', 'PGSC0003DMG400037979' => 'stu', 'PGSC0003DMG401012406' => 'stu', 'PGSC0003DMG402012406' => 'stu', 'Phvul.001G242000' => 'pvu', 'Phvul.002G230900' => 'pvu', 'Phvul.002G248900' => 'pvu', 'Phvul.005G074901' => 'pvu', 'Phvul.008G105100' => 'pvu', 'Phvul.008G224700' => 'pvu', 'Phvul.009G047600' => 'pvu', 'Phvul.010G033600' => 'pvu', 'Phvul.010G115900' => 'pvu', 'Phvul.011G163000' => 'pvu', 'Phvul.L005601' => 'pvu', 'Potri.001G085400' => 'ptr', 'Potri.003G145400' => 'ptr', 'Potri.006G015500' => 'ptr', 'Potri.008G067100' => 'ptr', 'Potri.010G190000' => 'ptr', 'Potri.011G115700' => 'ptr', 'Potri.012G019100' => 'ptr', 'Potri.012G019200' => 'ptr', 'Potri.014G101600' => 'ptr', 'Potri.015G009100' => 'ptr', 'Potri.015G009200' => 'ptr', 'Potri.016G115000' => 'ptr', 'Pp3c12_18290' => 'ppa', 'Pp3c16_6990' => 'ppa', 'Pp3c1_29420' => 'ppa', 'Pp3c25_560' => 'ppa', 'Pp3c2_12640' => 'ppa', 'Pp3c4_11360' => 'ppa', 'PRCOL_00003654' => 'pco', 'PRCOL_00004647' => 'pco', 'Prupe.2G193000' => 'ppe', 'Prupe.2G248800' => 'ppe', 'Prupe.2G314900' => 'ppe', 'Prupe.4G008100' => 'ppe', 'Prupe.4G051300' => 'ppe', 'Prupe.4G176300' => 'ppe', 'Prupe.5G128000' => 'ppe', 'Prupe.5G198400' => 'ppe', 'Prupe.6G276000' => 'ppe', 'Psat0s1495g0080' => 'psa', 'Psat0s2589g0040' => 'psa', 'Psat0s3104g0120' => 'psa', 'Psat2g033720' => 'psa', 'Psat3g067720' => 'psa', 'Psat3g067760' => 'psa', 'Psat3g129600' => 'psa', 'Psat3g129640' => 'psa', 'Psat3g129680' => 'psa', 'Psat3g130120' => 'psa', 'Psat3g130160' => 'psa', 'Psat3g130200' => 'psa', 'Psat4g094480' => 'psa', 'Psat4g162320' => 'psa', 'Psat5g075360' => 'psa', 'Psat5g126360' => 'psa', 'Psat6g053560' => 'psa', 'PSO063G4145' => 'pso', 'PSO135G0337' => 'pso', 'PSO339G0673' => 'pso', 'PSO339G3512' => 'pso', 'PSO384G1946' => 'pso', 'PSO541G1930' => 'pso', 'PSO675G5003' => 'pso', 'PSO782G2620' => 'pso', 'PSO801G0637' => 'pso', 'QL02p029046' => 'qlo', 'QL07p035818' => 'qlo', 'QL07p035830' => 'qlo', 'QL08p022801' => 'qlo', 'QL08p046079' => 'qlo', 'QL09p007736' => 'qlo', 'RcHm_v2.0_Chr1g0360481' => 'rch', 'RcHm_v2.0_Chr1g0370001' => 'rch', 'RcHm_v2.0_Chr1g0381841' => 'rch', 'RcHm_v2.0_Chr1g0381851' => 'rch', 'RcHm_v2.0_Chr1g0381861' => 'rch', 'RcHm_v2.0_Chr3g0463261' => 'rch', 'RcHm_v2.0_Chr5g0000961' => 'rch', 'RcHm_v2.0_Chr5g0008981' => 'rch', 'RcHm_v2.0_Chr5g0032731' => 'rch', 'RcHm_v2.0_Chr7g0186701' => 'rch', 'Rhsim01G0175800' => 'rsi', 'Rhsim02G0133300' => 'rsi', 'Rhsim02G0251000' => 'rsi', 'Rhsim03G0142200' => 'rsi', 'Rhsim03G0211700' => 'rsi', 'Rhsim04G0113900' => 'rsi', 'Rhsim05G0213800' => 'rsi', 'Rhsim06G0202500' => 'rsi', 'Rhsim09G0176700' => 'rsi', 'Rhsim09G0207400' => 'rsi', 'Rhsim09G0207500' => 'rsi', 'RhsimUnG0077200' => 'rsi', 'RhsimUnG0077400' => 'rsi', 'RhsimUnG0077900' => 'rsi', 'Sabra06G0011100' => 'sbr', 'Sabra08G0049300' => 'sbr', 'Sabra10G0146500' => 'sbr', 'Sabra11G0038800' => 'sbr', 'Sabra11G0101500' => 'sbr', 'Sabra12G0013700' => 'sbr', 'Sabra15G0007000' => 'sbr', 'Sabra15G0007100' => 'sbr', 'Sabra16G0110900' => 'sbr', 'Sabra16G0260200' => 'sbr', 'SalBow4G0546' => 'sbo', 'SalBow4G2684' => 'sbo', 'SalBow5G2778' => 'sbo', 'SalBow6G4828' => 'sbo', 'SalBow7G0556' => 'sbo', 'Sc01g0002410' => 'sci', 'Sc01g0010560' => 'sci', 'Sc03g0010170' => 'sci', 'Sc10g0002290' => 'sci', 'Sc11g0005000' => 'sci', 'Sc17g0006020' => 'sci', 'Sc18g0000990' => 'sci', 'Sc24g0000350' => 'sci', 'Sc25g0000990' => 'sci', 'Sc25g0001000' => 'sci', 'Sed0001207' => 'sed', 'Sed0004592' => 'sed', 'Sed0005055' => 'sed', 'Sed0005413' => 'sed', 'Sed0007115' => 'sed', 'Sed0007206' => 'sed', 'Sed0010194' => 'sed', 'Sed0013005' => 'sed', 'Sed0019405' => 'sed', 'Sed0019426' => 'sed', 'SEGI_11116' => 'sgi', 'SEGI_14762' => 'sgi', 'SEGI_20944' => 'sgi', 'SEGI_28196' => 'sgi', 'SEGI_36662' => 'sgi', 'SEGI_37394' => 'sgi', 'SGA_v2.0_scaffold104G30269' => 'sas', 'SGA_v2.0_scaffold110G31221' => 'sas', 'SGA_v2.0_scaffold18G08436' => 'sas', 'SGA_v2.0_scaffold232G43542' => 'sas', 'SGA_v2.0_scaffold240G44097' => 'sas', 'SGA_v2.0_scaffold36G14282' => 'sas', 'SGA_v2.0_scaffold44G16689' => 'sas', 'SGA_v2.0_scaffold581G53049' => 'sas', 'SGA_v2.0_scaffold60G20994' => 'sas', 'SGA_v2.0_scaffold73G24234' => 'sas', 'SHI05256' => 'shi', 'SHI15246' => 'shi', 'SHI26710' => 'shi', 'SMO115G0091' => 'smo', 'SMO118G0398' => 'smo', 'SMO134G0268' => 'smo', 'SMO144G0120' => 'smo', 'SMO367G0399' => 'smo', 'Solyc03g082720.3' => 'sly', 'Solyc03g082740.3' => 'sly', 'Solyc03g096080.4' => 'sly', 'Solyc03g096100.2' => 'sly', 'Solyc03g096110.3' => 'sly', 'Solyc03g096120.1' => 'sly', 'Solyc03g096130.2' => 'sly', 'Solyc03g096140.2' => 'sly', 'Solyc03g096150.3' => 'sly', 'Solyc03g096160.3' => 'sly', 'Solyc03g096250.3' => 'sly', 'Solyc03g096260.3' => 'sly', 'Solyc05g050510.3' => 'sly', 'Solyc07g062880.3' => 'sly', 'Solyc07g062890.4' => 'sly', 'Solyc07g062910.3' => 'sly', 'Solyc08g008520.3' => 'sly', 'Solyc09g014500.3' => 'sly', 'Solyc10g076750.2' => 'sly', 'Solyc12g013920.2' => 'sly', 'Sopen01g039920' => 'spe', 'Sopen03g022480' => 'spe', 'Sopen03g026160' => 'spe', 'Sopen03g026200' => 'spe', 'Sopen03g026210' => 'spe', 'Sopen03g026240' => 'spe', 'Sopen03g026250' => 'spe', 'Sopen03g026270' => 'spe', 'Sopen03g026350' => 'spe', 'Sopen03g026360' => 'spe', 'Sopen05g028920' => 'spe', 'Sopen07g031080' => 'spe', 'Sopen07g031090' => 'spe', 'Sopen07g031100' => 'spe', 'Sopen08g004370' => 'spe', 'Sopen09g007330' => 'spe', 'Sopen10g028390' => 'spe', 'Sopen12g005680' => 'spe', 'Sp3g07410' => 'spa', 'Sp3g09510' => 'spa', 'Sp4g22420' => 'spa', 'Sp5g06610' => 'spa', 'Sp6g16020' => 'spa', 'Sp7g25710' => 'spa', 'TAR375G0329' => 'tar', 'TAR623G0400' => 'tar', 'TAR626G1198' => 'tar', 'TAR627G0006' => 'tar', 'TAR629G2048' => 'tar', 'TAR629G3248' => 'tar', 'TAR633G2493' => 'tar', 'TAR636G2175' => 'tar', 'TAR636G2882' => 'tar', 'THA.LOC104799959' => 'tha', 'THA.LOC104810094' => 'tha', 'THA.LOC104810097' => 'tha', 'THA.LOC104811903' => 'tha', 'THA.LOC104816207' => 'tha', 'THA.LOC104816552' => 'tha', 'THA.LOC104820720' => 'tha', 'THA.LOC104823144' => 'tha', 'THA.LOC104825158' => 'tha', 'THA.LOC104825167' => 'tha', 'THA.LOC104826855' => 'tha', 'Thecc.01G338400' => 'tca', 'Thecc.03G203300' => 'tca', 'Thecc.03G203400' => 'tca', 'Thecc.03G203600' => 'tca', 'Thecc.03G223000' => 'tca', 'Thecc.03G223400' => 'tca', 'Thecc.05G017400' => 'tca', 'Thecc.06G235600' => 'tca', 'Thecc.07G095800' => 'tca', 'Thecc.10G020500' => 'tca', 'Thhalv10010822m.g' => 'esa', 'Thhalv10015019m.g' => 'esa', 'Thhalv10017415m.g' => 'esa', 'Thhalv10021761m.g' => 'esa', 'Thhalv10022021m.g' => 'esa', 'Thhalv10026634m.g' => 'esa', 'Thhalv10026935m.g' => 'esa', 'TPR.G15921' => 'tpr', 'TPR.G16330' => 'tpr', 'TPR.G2519' => 'tpr', 'TPR.G32102' => 'tpr', 'TPR.G33643' => 'tpr', 'TPR.G34810' => 'tpr', 'TPR.G38428' => 'tpr', 'TPR.G7962' => 'tpr', 'TWI09G1557' => 'twi', 'TWI15G0220' => 'twi', 'TWI38G2362' => 'twi', 'TWI39G0163' => 'twi', 'TWI39G1071' => 'twi', 'TWI39G1121' => 'twi', 'TWI63G0309' => 'twi', 'TWI63G1511' => 'twi', 'TWI73G0316' => 'twi', 'TWI74G0106' => 'twi', 'TWI77G0351' => 'twi', 'TWI81G0725' => 'twi', 'unitig_0.g2168' => 'ugi', 'unitig_0.g2454' => 'ugi', 'unitig_60.g25677' => 'ugi', 'unitig_747.g21416' => 'ugi', 'unitig_748.g7068' => 'ugi', 'vmacro06406' => 'vma', 'vmacro06976' => 'vma', 'vmacro08851' => 'vma', 'vmacro10052' => 'vma', 'vmacro10138' => 'vma', 'vmacro10139' => 'vma', 'vmacro11513' => 'vma', 'vmacro11888' => 'vma', 'vmacro12593' => 'vma', 'vmacro15925' => 'vma', 'vmacro20254' => 'vma', 'vmacro22160' => 'vma', 'VMungo0251G1940' => 'vmu', 'VMungo0251G2248' => 'vmu', 'VMungo0331G1838' => 'vmu', 'VMungo0331G1960' => 'vmu', 'VMungo0647G1232' => 'vmu', 'VMungo0720G2433' => 'vmu', 'VMungo1080G0790' => 'vmu', 'VMungo1127G0536' => 'vmu', 'VMungo1383G2991' => 'vmu', 'VMungo1383G2994' => 'vmu', 'Zm00001eb033190' => 'zma', 'Zm00001eb053850' => 'zma', 'Zm00001eb053860' => 'zma', 'Zm00001eb216920' => 'zma', 'Zm00001eb310430' => 'zma', 'Zm00001eb401200' => 'zma', 'Zm00001eb408710' => 'zma' ) $gf_id = 'HOM05D000553' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000553' ) $data_identifier = 'HOM05D000553' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 17, 'amhyb' => (int) 6, 'aly' => (int) 8, 'aox' => (int) 6, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 9, 'cqu' => (int) 11, 'bca' => (int) 29, 'bol' => (int) 20, 'bra' => (int) 18, 'can' => (int) 9, 'cansat' => (int) 8, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'cbr' => (int) 3, 'ccan' => (int) 5, 'cde' => (int) 3, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 2, 'csa' => (int) 8, 'camsi' => (int) 16, 'dca' => (int) 7, 'din' => (int) 7, 'dzi' => (int) 15, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 11, 'fan' => (int) 30, 'fve' => (int) 9, 'gma' => (int) 19, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 10, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 6, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 4, 'lja' => (int) 15, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 3, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 19, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 21, 'nnu' => (int) 4, 'oeu' => (int) 12, 'osa' => (int) 6, 'pax' => (int) 12, 'pgr' => (int) 7, 'stu' => (int) 13, 'pvu' => (int) 11, 'ptr' => (int) 12, 'ppa' => (int) 6, 'pco' => (int) 2, 'ppe' => (int) 9, 'psa' => (int) 17, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 10, 'rsi' => (int) 14, 'sbr' => (int) 10, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 5, 'sly' => (int) 20, 'spe' => (int) 18, 'spa' => (int) 6, 'tar' => (int) 9, 'tha' => (int) 11, 'tca' => (int) 10, 'esa' => (int) 7, 'tpr' => (int) 8, 'twi' => (int) 12, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408710' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1